Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RpgrQ9R0X5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Gm16026-204ENSMUST00000162652 683 ntBASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Gm27525-201ENSMUST00000184465 107 ntBASIC14.52□□□□□ -0.09
RpgrQ9R0X5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RpgrQ9R0X5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Gm15427-201ENSMUST00000117288 531 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Gm2756-201ENSMUST00000195851 400 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Gm44492-201ENSMUST00000197012 141 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RpgrQ9R0X5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Gm16198-201ENSMUST00000118766 670 ntBASIC14.5□□□□□ -0.09
RpgrQ9R0X5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms