Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gm18489-201ENSMUST00000172565 551 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Gm6296-201ENSMUST00000222599 943 ntBASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnf4Q9QZS2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Olfr129-201ENSMUST00000122318 993 ntBASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf4Q9QZS2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Gm29518-201ENSMUST00000190858 372 ntBASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf4Q9QZS2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms