Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 BC001981-202ENSMUST00000191393 1545 ntBASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm12882-201ENSMUST00000121696 517 ntBASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm44344-201ENSMUST00000200287 129 ntBASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Shd-206ENSMUST00000225145 998 ntBASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Gm27306-201ENSMUST00000183970 107 ntBASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Gm38294-201ENSMUST00000192831 381 ntBASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssmem1Q9D9Y8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Mir1897-201ENSMUST00000122581 272 ntBASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ssmem1Q9D9Y8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssmem1Q9D9Y8 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms