Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.76■□□□□ 0.59
U2af1Q9D883 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.75■□□□□ 0.59
U2af1Q9D883 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.75■□□□□ 0.59
U2af1Q9D883 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.75■□□□□ 0.59
U2af1Q9D883 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.75■□□□□ 0.59
U2af1Q9D883 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
U2af1Q9D883 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
U2af1Q9D883 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
U2af1Q9D883 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Gm27838-201ENSMUST00000184829 128 ntBASIC18.74■□□□□ 0.59
U2af1Q9D883 Mir6977-201ENSMUST00000184960 64 ntBASIC18.74■□□□□ 0.59
U2af1Q9D883 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.74■□□□□ 0.59
U2af1Q9D883 Gm33320-201ENSMUST00000192232 530 ntBASIC18.74■□□□□ 0.59
U2af1Q9D883 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
U2af1Q9D883 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
U2af1Q9D883 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
U2af1Q9D883 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.73■□□□□ 0.59
U2af1Q9D883 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.73■□□□□ 0.59
U2af1Q9D883 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.73■□□□□ 0.59
U2af1Q9D883 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
U2af1Q9D883 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.73■□□□□ 0.59
U2af1Q9D883 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
U2af1Q9D883 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
U2af1Q9D883 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
U2af1Q9D883 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms