Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gm43438-201ENSMUST00000198133 379 ntBASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stag1Q9D3E6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Stag1Q9D3E6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Stag1Q9D3E6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Stag1Q9D3E6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Stag1Q9D3E6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Stag1Q9D3E6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.95■□□□□ 0.3
Stag1Q9D3E6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Gm4804-201ENSMUST00000182234 999 ntBASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Stag1Q9D3E6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Stag1Q9D3E6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms