Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm33320-201ENSMUST00000192232 530 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Syt7-204ENSMUST00000223586 1344 ntBASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rita1Q9D1H0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm15460-201ENSMUST00000118147 391 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm15321-201ENSMUST00000121290 288 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm16215-201ENSMUST00000161990 637 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm27838-201ENSMUST00000184829 128 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Mir6977-201ENSMUST00000184960 64 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.11□□□□□ -0.31
Rita1Q9D1H0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rita1Q9D1H0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Gm27437-201ENSMUST00000183429 107 ntBASIC13.1□□□□□ -0.31
Rita1Q9D1H0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.1□□□□□ -0.31
Rita1Q9D1H0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms