Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.2□□□□□ -0.3
Trim13Q9CYB0 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Matn2-206ENSMUST00000228570 2798 ntBASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim13Q9CYB0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm27459-201ENSMUST00000184860 107 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm27741-201ENSMUST00000185060 237 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44357-201ENSMUST00000195897 142 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm19658-201ENSMUST00000196231 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44367-201ENSMUST00000196836 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44350-201ENSMUST00000197197 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44390-201ENSMUST00000197533 144 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44313-201ENSMUST00000198018 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44486-201ENSMUST00000198508 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44314-201ENSMUST00000199263 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44394-201ENSMUST00000199558 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44484-201ENSMUST00000199873 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44466-201ENSMUST00000200264 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44359-201ENSMUST00000200671 138 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim13Q9CYB0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim13Q9CYB0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms