Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Gm27459-201ENSMUST00000184860 107 ntBASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Gm43347-201ENSMUST00000200226 580 ntBASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ssu72Q9CY97 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Gm16198-201ENSMUST00000118766 670 ntBASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Gm27300-201ENSMUST00000184085 97 ntBASIC14.17□□□□□ -0.14
Ssu72Q9CY97 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Gm27335-201ENSMUST00000184758 97 ntBASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ssu72Q9CY97 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Gm34391-201ENSMUST00000203706 907 ntBASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssu72Q9CY97 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Gm7153-201ENSMUST00000117092 455 ntBASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssu72Q9CY97 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms