Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Gm13597-201ENSMUST00000121239 375 ntBASIC15.52■□□□□ 0.08
Ssr1Q9CY50 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Mzt1-203ENSMUST00000227948 952 ntBASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Gm7461-201ENSMUST00000058918 827 ntBASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ssr1Q9CY50 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ssr1Q9CY50 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Gm10154-201ENSMUST00000084445 354 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ssr1Q9CY50 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Gm13464-201ENSMUST00000119418 935 ntBASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ssr1Q9CY50 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms