Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc3Q9CW03 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.79■□□□□ 0.28
Smc3Q9CW03 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.79■□□□□ 0.28
Smc3Q9CW03 Gm7461-201ENSMUST00000058918 827 ntBASIC16.79■□□□□ 0.28
Smc3Q9CW03 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.79■□□□□ 0.28
Smc3Q9CW03 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc3Q9CW03 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.79■□□□□ 0.28
Smc3Q9CW03 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Gm8584-201ENSMUST00000171982 758 ntBASIC16.78■□□□□ 0.28
Smc3Q9CW03 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.78■□□□□ 0.28
Smc3Q9CW03 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc3Q9CW03 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.77■□□□□ 0.28
Smc3Q9CW03 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc3Q9CW03 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc3Q9CW03 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Gm10275-202ENSMUST00000168697 495 ntBASIC16.76■□□□□ 0.27
Smc3Q9CW03 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.76■□□□□ 0.27
Smc3Q9CW03 Gm27920-201ENSMUST00000183953 96 ntBASIC16.76■□□□□ 0.27
Smc3Q9CW03 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.76■□□□□ 0.27
Smc3Q9CW03 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms