Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm5587-201ENSMUST00000206270 674 ntBASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RTRAFQ9CQE8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm11950-201ENSMUST00000121615 838 ntBASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm18032-201ENSMUST00000222541 538 ntBASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RTRAFQ9CQE8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RTRAFQ9CQE8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RTRAFQ9CQE8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
RTRAFQ9CQE8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
RTRAFQ9CQE8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RTRAFQ9CQE8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RTRAFQ9CQE8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms