Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm10653-202ENSMUST00000139570 835 ntBASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Rpl39lQ9CQD0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Rpl39lQ9CQD0 Gm45630-201ENSMUST00000210243 1911 ntBASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm11453-201ENSMUST00000117318 1007 ntBASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm13312-201ENSMUST00000119631 718 ntBASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.27□□□□□ -0.93
Rpl39lQ9CQD0 Gm22697-201ENSMUST00000175194 63 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms