Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim11Q99PQ2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim11Q99PQ2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Gm8584-201ENSMUST00000171982 758 ntBASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Gm27525-201ENSMUST00000184465 107 ntBASIC16.26■□□□□ 0.19
Trim11Q99PQ2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim11Q99PQ2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim11Q99PQ2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.24■□□□□ 0.19
Trim11Q99PQ2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms