Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim8Q99PJ2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim8Q99PJ2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm15590-201ENSMUST00000078419 552 ntBASIC14□□□□□ -0.17
Trim8Q99PJ2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Gm43570-201ENSMUST00000199951 3688 ntBASIC14□□□□□ -0.17
Trim8Q99PJ2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14□□□□□ -0.17
Trim8Q99PJ2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim8Q99PJ2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Gm43514-201ENSMUST00000198852 424 ntBASIC13.99□□□□□ -0.17
Trim8Q99PJ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim8Q99PJ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim8Q99PJ2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms