Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12203-201ENSMUST00000118235 598 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm12209-201ENSMUST00000120089 596 ntBASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh23Q99PF4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Gm27320-201ENSMUST00000184892 109 ntBASIC14.24□□□□□ -0.13
Cdh23Q99PF4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdh23Q99PF4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm24990-201ENSMUST00000157406 323 ntBASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gm38223-201ENSMUST00000194484 695 ntBASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh23Q99PF4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Gm5687-201ENSMUST00000118252 640 ntBASIC14.22□□□□□ -0.13
Cdh23Q99PF4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh23Q99PF4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms