Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Msh4Q99MT2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.92□□□□□ -0.18
Msh4Q99MT2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Gm18737-201ENSMUST00000173594 937 ntBASIC13.92□□□□□ -0.18
Msh4Q99MT2 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.92□□□□□ -0.18
Msh4Q99MT2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.92□□□□□ -0.18
Msh4Q99MT2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Msh4Q99MT2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.91□□□□□ -0.18
Msh4Q99MT2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Gm27920-201ENSMUST00000183953 96 ntBASIC13.91□□□□□ -0.18
Msh4Q99MT2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.91□□□□□ -0.18
Msh4Q99MT2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Msh4Q99MT2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22065-201ENSMUST00000103753 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22066-201ENSMUST00000103761 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24932-201ENSMUST00000103763 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24115-201ENSMUST00000103799 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22190-201ENSMUST00000103827 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm22191-201ENSMUST00000103831 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm24721-201ENSMUST00000103849 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm28018-201ENSMUST00000103869 110 ntBASIC13.9□□□□□ -0.18
Msh4Q99MT2 Gm26399-201ENSMUST00000103937 110 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms