Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Gm27731-201ENSMUST00000185192 107 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx6-1Q99MA9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm14660-201ENSMUST00000119809 575 ntBASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm4804-201ENSMUST00000182234 999 ntBASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx6-1Q99MA9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx6-1Q99MA9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx6-1Q99MA9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.33□□□□□ -0.27
Nkx6-1Q99MA9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx6-1Q99MA9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx6-1Q99MA9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx6-1Q99MA9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms