Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gm10275-202ENSMUST00000168697 495 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gm8584-201ENSMUST00000171982 758 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gm10275-201ENSMUST00000092620 635 ntBASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdk5rap3Q99LM2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Gm7461-201ENSMUST00000058918 827 ntBASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdk5rap3Q99LM2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdk5rap3Q99LM2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Psmb5-202ENSMUST00000227257 622 ntBASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdk5rap3Q99LM2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms