Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cstf3Q99LI7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm6973-201ENSMUST00000117080 721 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm11543-201ENSMUST00000120758 370 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm10275-202ENSMUST00000168697 495 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm18206-201ENSMUST00000207027 926 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Gm10275-201ENSMUST00000092620 635 ntBASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf3Q99LI7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf3Q99LI7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cstf3Q99LI7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms