Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm13392-201ENSMUST00000117708 150 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Gm6244-201ENSMUST00000178732 841 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Mir7654-201ENSMUST00000185082 70 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Gm42693-201ENSMUST00000196779 631 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Gm17794-201ENSMUST00000220252 955 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Olfr582-201ENSMUST00000098212 960 ntBASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf1Q99LC2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm18307-201ENSMUST00000206864 949 ntBASIC14.24□□□□□ -0.13
Cstf1Q99LC2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm10478-201ENSMUST00000084451 396 ntBASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf1Q99LC2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Gm8062-201ENSMUST00000139696 444 ntBASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Gm17420-201ENSMUST00000164753 153 ntBASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.23□□□□□ -0.13
Cstf1Q99LC2 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.23□□□□□ -0.13
Cstf1Q99LC2 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf1Q99LC2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms