Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.4□□□□□ -0.1
Cdk9Q99J95 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk9Q99J95 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cdk9Q99J95 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.39□□□□□ -0.11
Cdk9Q99J95 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.39□□□□□ -0.11
Cdk9Q99J95 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.39□□□□□ -0.11
Cdk9Q99J95 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdk9Q99J95 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Gm6376-201ENSMUST00000209407 580 ntBASIC14.38□□□□□ -0.11
Cdk9Q99J95 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.38□□□□□ -0.11
Cdk9Q99J95 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk9Q99J95 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.37□□□□□ -0.11
Cdk9Q99J95 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk9Q99J95 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms