Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.95□□□□□ -0.02
Pcdha3Q91Y16 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdha3Q91Y16 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Gm22175-201ENSMUST00000175007 78 ntBASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdha3Q91Y16 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdha3Q91Y16 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms