Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga3Q91XY5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Rpph1-201ENSMUST00000175096 319 ntBASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Matn2-206ENSMUST00000228570 2798 ntBASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.74□□□□□ -0.37
Pcdhga3Q91XY5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gm10175-201ENSMUST00000086013 645 ntBASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga3Q91XY5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga3Q91XY5 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms