Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx41Q91VN6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx41Q91VN6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx41Q91VN6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx41Q91VN6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Gm23547-201ENSMUST00000158210 271 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Mir8102-201ENSMUST00000184148 139 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Mir6977-201ENSMUST00000184960 64 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx41Q91VN6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Matn2-206ENSMUST00000228570 2798 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm13464-201ENSMUST00000119418 935 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm27437-201ENSMUST00000183429 107 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm27533-201ENSMUST00000183800 152 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx41Q91VN6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms