Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm6550-201ENSMUST00000187574 993 ntBASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gm6376-201ENSMUST00000209407 580 ntBASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nudcd3Q8R1N4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nudcd3Q8R1N4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gm43347-201ENSMUST00000200226 580 ntBASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nudcd3Q8R1N4 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.26□□□□□ -0.13
Nudcd3Q8R1N4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms