Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm7029-201ENSMUST00000173226 450 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm16505-201ENSMUST00000179981 232 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Nsd1-205ENSMUST00000224693 852 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.11■□□□□ 0.33
Col23a1Q8K4G2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Col23a1Q8K4G2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Gm27341-201ENSMUST00000183570 106 ntBASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Gm37497-201ENSMUST00000195830 798 ntBASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Rps4l-202ENSMUST00000204242 789 ntBASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col23a1Q8K4G2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col23a1Q8K4G2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gm22902-201ENSMUST00000158488 302 ntBASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.08■□□□□ 0.32
Col23a1Q8K4G2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms