Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vrk3Q8K3G5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm9727-201ENSMUST00000161387 555 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm27301-201ENSMUST00000184012 127 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm44492-201ENSMUST00000197012 141 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm2451-201ENSMUST00000199447 999 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm10290-201ENSMUST00000200451 999 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vrk3Q8K3G5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm14042-201ENSMUST00000120139 833 ntBASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm16026-204ENSMUST00000162652 683 ntBASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm27525-201ENSMUST00000184465 107 ntBASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.12□□□□□ -0.47
Vrk3Q8K3G5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk3Q8K3G5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms