Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Gm27572-201ENSMUST00000183702 255 ntBASIC16.07■□□□□ 0.16
Syne4Q8CII8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.07■□□□□ 0.16
Syne4Q8CII8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Syne4Q8CII8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.06■□□□□ 0.16
Syne4Q8CII8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm38671-201ENSMUST00000200573 130 ntBASIC16.06■□□□□ 0.16
Syne4Q8CII8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Syne4Q8CII8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm26464-201ENSMUST00000157094 305 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm8927-201ENSMUST00000181978 981 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm43179-201ENSMUST00000198797 275 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Gm3222-201ENSMUST00000071282 990 ntBASIC16.05■□□□□ 0.16
Syne4Q8CII8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Syne4Q8CII8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.04■□□□□ 0.16
Syne4Q8CII8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.04■□□□□ 0.16
Syne4Q8CII8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Gm10012-201ENSMUST00000078252 192 ntBASIC16.04■□□□□ 0.16
Syne4Q8CII8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.04■□□□□ 0.16
Syne4Q8CII8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms