Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Psmb5-202ENSMUST00000227257 622 ntBASIC17.63■□□□□ 0.41
Smc5Q8CG46 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc5Q8CG46 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.62■□□□□ 0.41
Smc5Q8CG46 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.62■□□□□ 0.41
Smc5Q8CG46 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Smc5Q8CG46 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gm15427-201ENSMUST00000117288 531 ntBASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.61■□□□□ 0.41
Smc5Q8CG46 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Grk6-205ENSMUST00000224653 2976 ntBASIC17.61■□□□□ 0.41
Smc5Q8CG46 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smc5Q8CG46 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.6■□□□□ 0.41
Smc5Q8CG46 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smc5Q8CG46 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smc5Q8CG46 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.59■□□□□ 0.41
Smc5Q8CG46 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.59■□□□□ 0.41
Smc5Q8CG46 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smc5Q8CG46 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.59■□□□□ 0.41
Smc5Q8CG46 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms