Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vps53Q8CCB4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps53Q8CCB4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Gm11424-201ENSMUST00000121929 829 ntBASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps53Q8CCB4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Gm16026-204ENSMUST00000162652 683 ntBASIC16.61■□□□□ 0.25
Vps53Q8CCB4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps53Q8CCB4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm13464-201ENSMUST00000119418 935 ntBASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm27989-201ENSMUST00000184721 107 ntBASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps53Q8CCB4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps53Q8CCB4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms