Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Alx1Q8C8B0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm24694-201ENSMUST00000180054 110 ntBASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm27663-201ENSMUST00000184839 110 ntBASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Syt7-204ENSMUST00000223586 1344 ntBASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Alx1Q8C8B0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Alx1Q8C8B0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gm21854-201ENSMUST00000179901 471 ntBASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alx1Q8C8B0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms