Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm37935-201ENSMUST00000192012 982 ntBASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Trim9Q8C7M3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Gm27631-201ENSMUST00000184163 466 ntBASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Gm45453-201ENSMUST00000211758 853 ntBASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim9Q8C7M3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 AA619741-201ENSMUST00000195095 646 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim9Q8C7M3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gm5566-201ENSMUST00000116118 459 ntBASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gm6736-201ENSMUST00000166583 948 ntBASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gm24158-201ENSMUST00000175263 71 ntBASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Gm44608-201ENSMUST00000206827 855 ntBASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim9Q8C7M3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms