Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Col6a6Q8C6K9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a6Q8C6K9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a6Q8C6K9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a6Q8C6K9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms