Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.46□□□□□ -0.1
Sh3rf2Q8BZT2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Sh3rf2Q8BZT2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Sh3rf2Q8BZT2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sh3rf2Q8BZT2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm6745-201ENSMUST00000199216 526 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sh3rf2Q8BZT2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Gm8515-201ENSMUST00000194852 576 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Gm6180-201ENSMUST00000065243 498 ntBASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sh3rf2Q8BZT2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sh3rf2Q8BZT2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms