Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm44855-201ENSMUST00000205725 362 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm20445-201ENSMUST00000061905 565 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Syt7-205ENSMUST00000224135 1557 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Carlr-201ENSMUST00000181515 2574 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdk5rap1Q8BTW8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm7488-201ENSMUST00000117148 684 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm15957-201ENSMUST00000118893 974 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm29667-201ENSMUST00000190817 490 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm33320-201ENSMUST00000192232 530 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdk5rap1Q8BTW8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdk5rap1Q8BTW8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms