Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rd3Q8BRE0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rd3Q8BRE0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gm8602-201ENSMUST00000184045 607 ntBASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rd3Q8BRE0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rd3Q8BRE0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms