Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh19Q80TF3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Syt7-205ENSMUST00000224135 1557 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm12882-201ENSMUST00000121696 517 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm33320-201ENSMUST00000192232 530 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm44855-201ENSMUST00000205725 362 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm20445-201ENSMUST00000061905 565 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm2423-201ENSMUST00000074863 733 ntBASIC14□□□□□ -0.17
Pcdh19Q80TF3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh19Q80TF3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Gm6916-202ENSMUST00000205523 195 ntBASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh19Q80TF3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh19Q80TF3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms