Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gm10499-201ENSMUST00000174094 934 ntBASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf38bQ80SY5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf38bQ80SY5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf38bQ80SY5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Prpf38bQ80SY5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm11918-201ENSMUST00000121660 179 ntBASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Prpf38bQ80SY5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Gm22189-201ENSMUST00000103822 86 ntBASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Gm9257-201ENSMUST00000221254 232 ntBASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf38bQ80SY5 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Gm37917-201ENSMUST00000194711 392 ntBASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.93□□□□□ -0.02
Prpf38bQ80SY5 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms