Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf139Q7TMV1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf139Q7TMV1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm12428-201ENSMUST00000119844 727 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm25144-201ENSMUST00000179561 110 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm25352-201ENSMUST00000179815 110 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gm27533-201ENSMUST00000183800 152 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf139Q7TMV1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf139Q7TMV1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf139Q7TMV1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Mir6956-201ENSMUST00000183598 62 ntBASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Shd-206ENSMUST00000225145 998 ntBASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf139Q7TMV1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf139Q7TMV1 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf139Q7TMV1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rnf139Q7TMV1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf139Q7TMV1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf139Q7TMV1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms