Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Gm9229-201ENSMUST00000222777 126 ntBASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Mir125a-201ENSMUST00000083545 68 ntBASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.41□□□□□ -0.1
Nudcd1Q6PIP5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nudcd1Q6PIP5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nudcd1Q6PIP5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Gm2423-201ENSMUST00000074863 733 ntBASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nudcd1Q6PIP5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Gm4875-201ENSMUST00000118257 786 ntBASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nudcd1Q6PIP5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms