Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Slc46a1Q6PEM8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Gm16215-201ENSMUST00000161990 637 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Olfr286-202ENSMUST00000205305 969 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Gm46209-201ENSMUST00000217912 553 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc46a1Q6PEM8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Gm14719-201ENSMUST00000121891 340 ntBASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Gm37230-201ENSMUST00000194491 818 ntBASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Dupd1-202ENSMUST00000224735 548 ntBASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc46a1Q6PEM8 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms