Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gm6912-201ENSMUST00000117218 544 ntBASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdzrn3Q69ZS0 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Gm12091-201ENSMUST00000146791 830 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Gm9908-201ENSMUST00000211534 448 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Gm25857-201ENSMUST00000082788 129 ntBASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pdzrn3Q69ZS0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Gm12138-201ENSMUST00000122180 951 ntBASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdzrn3Q69ZS0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Gm9182-201ENSMUST00000217829 639 ntBASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdzrn3Q69ZS0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdzrn3Q69ZS0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms