Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clcn1Q64347 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.05■□□□□ 0.48
Clcn1Q64347 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn1Q64347 Gm10275-202ENSMUST00000168697 495 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Gm18062-201ENSMUST00000208020 547 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 Gm18055-201ENSMUST00000208254 547 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Gm10275-201ENSMUST00000092620 635 ntBASIC18.05■□□□□ 0.48
Clcn1Q64347 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Clcn1Q64347 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn1Q64347 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm11425-201ENSMUST00000119608 498 ntBASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm15806-201ENSMUST00000120696 955 ntBASIC18.04■□□□□ 0.48
Clcn1Q64347 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.04■□□□□ 0.48
Clcn1Q64347 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm9396-201ENSMUST00000076703 567 ntBASIC18.04■□□□□ 0.48
Clcn1Q64347 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.04■□□□□ 0.48
Clcn1Q64347 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.04■□□□□ 0.48
Clcn1Q64347 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Clcn1Q64347 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clcn1Q64347 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Clcn1Q64347 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clcn1Q64347 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clcn1Q64347 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Clcn1Q64347 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.02■□□□□ 0.47
Clcn1Q64347 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Clcn1Q64347 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clcn1Q64347 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.01■□□□□ 0.47
Clcn1Q64347 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clcn1Q64347 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms