Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.88□□□□□ -0.67
Zfp248Q640N4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Zfp248Q640N4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Gm9385-201ENSMUST00000117563 472 ntBASIC10.87□□□□□ -0.67
Zfp248Q640N4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Gm5479-201ENSMUST00000160578 435 ntBASIC10.87□□□□□ -0.67
Zfp248Q640N4 Gm9727-201ENSMUST00000161387 555 ntBASIC10.87□□□□□ -0.67
Zfp248Q640N4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Gm37230-201ENSMUST00000194491 818 ntBASIC10.87□□□□□ -0.67
Zfp248Q640N4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.87□□□□□ -0.67
Zfp248Q640N4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Zfp248Q640N4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.86□□□□□ -0.67
Zfp248Q640N4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Gm17968-201ENSMUST00000194902 784 ntBASIC10.86□□□□□ -0.67
Zfp248Q640N4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.86□□□□□ -0.67
Zfp248Q640N4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Zfp248Q640N4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Zfp248Q640N4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms