Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Scn9aQ62205 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scn9aQ62205 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.5■□□□□ 0.23
Scn9aQ62205 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn9aQ62205 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm2445-201ENSMUST00000182798 989 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm6334-201ENSMUST00000207083 228 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn9aQ62205 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn9aQ62205 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm7029-201ENSMUST00000173226 450 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.49■□□□□ 0.23
Scn9aQ62205 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn9aQ62205 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.49■□□□□ 0.23
Scn9aQ62205 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Gm12176-201ENSMUST00000121420 875 ntBASIC16.48■□□□□ 0.23
Scn9aQ62205 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn9aQ62205 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.48■□□□□ 0.23
Scn9aQ62205 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.48■□□□□ 0.23
Scn9aQ62205 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn9aQ62205 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn9aQ62205 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn9aQ62205 Mir877-201ENSMUST00000104738 85 ntBASIC16.47■□□□□ 0.23
Scn9aQ62205 Gm18935-201ENSMUST00000212692 664 ntBASIC16.47■□□□□ 0.23
Scn9aQ62205 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.47■□□□□ 0.23
Scn9aQ62205 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.47■□□□□ 0.23
Scn9aQ62205 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn9aQ62205 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn9aQ62205 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn9aQ62205 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn9aQ62205 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn9aQ62205 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn9aQ62205 Gm12241-201ENSMUST00000118330 726 ntBASIC16.46■□□□□ 0.23
Scn9aQ62205 Gm13786-201ENSMUST00000122371 333 ntBASIC16.46■□□□□ 0.23
Scn9aQ62205 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn9aQ62205 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn9aQ62205 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms