Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.86□□□□□ -0.03
Smarcd1Q61466 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.86□□□□□ -0.03
Smarcd1Q61466 Gm15460-201ENSMUST00000118147 391 ntBASIC14.86□□□□□ -0.03
Smarcd1Q61466 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Gm12134-201ENSMUST00000122109 520 ntBASIC14.86□□□□□ -0.03
Smarcd1Q61466 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.86□□□□□ -0.03
Smarcd1Q61466 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Smarcd1Q61466 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.85□□□□□ -0.03
Smarcd1Q61466 Gm27437-201ENSMUST00000183429 107 ntBASIC14.85□□□□□ -0.03
Smarcd1Q61466 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.85□□□□□ -0.03
Smarcd1Q61466 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smarcd1Q61466 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Gm15393-201ENSMUST00000120499 219 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Syt7-204ENSMUST00000223586 1344 ntBASIC14.84□□□□□ -0.03
Smarcd1Q61466 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarcd1Q61466 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd1Q61466 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd1Q61466 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smarcd1Q61466 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarcd1Q61466 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarcd1Q61466 Gm12585-201ENSMUST00000117307 290 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms