Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Itm2b-204ENSMUST00000228637 783 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col12a1Q60847 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.81□□□□□ -0.2
Col12a1Q60847 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col12a1Q60847 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col12a1Q60847 Gm4986-201ENSMUST00000119731 549 ntBASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm14028-201ENSMUST00000117434 479 ntBASIC13.8□□□□□ -0.2
Col12a1Q60847 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Col12a1Q60847 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.8□□□□□ -0.2
Col12a1Q60847 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.8□□□□□ -0.2
Col12a1Q60847 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col12a1Q60847 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col12a1Q60847 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Gm37489-201ENSMUST00000191883 159 ntBASIC13.79□□□□□ -0.2
Col12a1Q60847 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Gm8285-201ENSMUST00000208293 759 ntBASIC13.79□□□□□ -0.2
Col12a1Q60847 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Gm14017-201ENSMUST00000121934 386 ntBASIC13.79□□□□□ -0.2
Col12a1Q60847 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.79□□□□□ -0.2
Col12a1Q60847 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col12a1Q60847 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col12a1Q60847 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col12a1Q60847 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col12a1Q60847 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col12a1Q60847 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms