Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Gm7153-201ENSMUST00000117092 455 ntBASIC13.62□□□□□ -0.23
Nr1h4Q60641 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.62□□□□□ -0.23
Nr1h4Q60641 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.62□□□□□ -0.23
Nr1h4Q60641 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.62□□□□□ -0.23
Nr1h4Q60641 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
Nr1h4Q60641 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.61□□□□□ -0.23
Nr1h4Q60641 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.61□□□□□ -0.23
Nr1h4Q60641 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nr1h4Q60641 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.6□□□□□ -0.23
Nr1h4Q60641 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gm16026-204ENSMUST00000162652 683 ntBASIC13.6□□□□□ -0.23
Nr1h4Q60641 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gm10060-201ENSMUST00000212002 111 ntBASIC13.6□□□□□ -0.23
Nr1h4Q60641 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nr1h4Q60641 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.59□□□□□ -0.23
Nr1h4Q60641 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nr1h4Q60641 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms