Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Shroom1Q5SX79 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gm9229-201ENSMUST00000222777 126 ntBASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shroom1Q5SX79 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Gm22189-201ENSMUST00000103822 86 ntBASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 AA619741-201ENSMUST00000195095 646 ntBASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom1Q5SX79 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Gm20445-201ENSMUST00000061905 565 ntBASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom1Q5SX79 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms