Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Gm43514-201ENSMUST00000198852 424 ntBASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav5d-4Q5R1F6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav5d-4Q5R1F6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav5d-4Q5R1F6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Gm25911-201ENSMUST00000157621 56 ntBASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Trav5d-4Q5R1F6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms